Package: bayesImageS 0.6-1

bayesImageS: Bayesian Methods for Image Segmentation using a Potts Model

Various algorithms for segmentation of 2D and 3D images, such as computed tomography and satellite remote sensing. This package implements Bayesian image analysis using the hidden Potts model with external field prior of Moores et al. (2015) <doi:10.1016/j.csda.2014.12.001>. Latent labels are sampled using chequerboard updating or Swendsen-Wang. Algorithms for the smoothing parameter include pseudolikelihood, path sampling, the exchange algorithm, approximate Bayesian computation (ABC-MCMC and ABC-SMC), and the parametric functional approximate Bayesian (PFAB) algorithm. Refer to <doi:10.1007/978-3-030-42553-1_6> for an overview and also to <doi:10.1007/s11222-014-9525-6> and <doi:10.1214/18-BA1130> for further details of specific algorithms.

Authors:Matt Moores [aut, cre], Dai Feng [ctb], Kerrie Mengersen [aut, ths]

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NEWS

# Install 'bayesImageS' in R:
install.packages('bayesImageS', repos = c('https://mooresm.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://bitbucket.org/azeari/bayesimages

Uses libs:
  • c++ā€“ GNU Standard C++ Library v3

On CRAN:

cpp

4.96 score 46 scripts 815 downloads 14 exports 2 dependencies

Last updated 4 years agofrom:8208b8a201. Checks:1 OK, 10 WARNING. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 31 2025
R-4.5-win-x86_64WARNINGJan 31 2025
R-4.5-mac-x86_64WARNINGJan 31 2025
R-4.5-mac-aarch64WARNINGJan 31 2025
R-4.5-linux-x86_64WARNINGJan 31 2025
R-4.4-win-x86_64WARNINGJan 31 2025
R-4.4-mac-x86_64WARNINGJan 31 2025
R-4.4-mac-aarch64WARNINGJan 31 2025
R-4.3-win-x86_64WARNINGJan 31 2025
R-4.3-mac-x86_64WARNINGJan 31 2025
R-4.3-mac-aarch64WARNINGJan 01 2025

Exports:exactPottsgetBlocksgetEdgesgetNeighborsgibbsGMMgibbsNormgibbsPottsinitSedkimcmcPottsmcmcPottsNoDatasmcPottssufficientStatswNoDatatestResample

Dependencies:RcppRcppArmadillo

bayesImageS: An R Package for Bayesian Image Segmentation using a Hidden Potts Model

Rendered fromBackground.Rmdusingknitr::rmarkdownon Jan 31 2025.

Last update: 2018-06-05
Started: 2018-06-05

mcmcPotts

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Last update: 2018-06-05
Started: 2017-11-23

mcmcPottsNoData

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swNoData

Rendered fromswNoData.Rmdusingknitr::rmarkdownon Jan 31 2025.

Last update: 2018-08-29
Started: 2017-11-23