Package: bayesImageS 0.6-1

bayesImageS: Bayesian Methods for Image Segmentation using a Potts Model

Various algorithms for segmentation of 2D and 3D images, such as computed tomography and satellite remote sensing. This package implements Bayesian image analysis using the hidden Potts model with external field prior of Moores et al. (2015) <doi:10.1016/j.csda.2014.12.001>. Latent labels are sampled using chequerboard updating or Swendsen-Wang. Algorithms for the smoothing parameter include pseudolikelihood, path sampling, the exchange algorithm, approximate Bayesian computation (ABC-MCMC and ABC-SMC), and the parametric functional approximate Bayesian (PFAB) algorithm. Refer to <doi:10.1007/978-3-030-42553-1_6> for an overview and also to <doi:10.1007/s11222-014-9525-6> and <doi:10.1214/18-BA1130> for further details of specific algorithms.

Authors:Matt Moores [aut, cre], Dai Feng [ctb], Kerrie Mengersen [aut, ths]

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NEWS

# Install 'bayesImageS' in R:
install.packages('bayesImageS', repos = c('https://mooresm.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://bitbucket.org/azeari/bayesimages

Uses libs:
  • c++ā€“ GNU Standard C++ Library v3
Datasets:

    On CRAN:

    4.48 score 15 scripts 841 downloads 14 exports 2 dependencies

    Last updated 4 years agofrom:8208b8a201. Checks:OK: 1 WARNING: 8. Indexed: yes.

    TargetResultDate
    Doc / VignettesOKNov 02 2024
    R-4.5-win-x86_64WARNINGNov 02 2024
    R-4.5-linux-x86_64WARNINGNov 02 2024
    R-4.4-win-x86_64WARNINGNov 02 2024
    R-4.4-mac-x86_64WARNINGNov 02 2024
    R-4.4-mac-aarch64WARNINGNov 02 2024
    R-4.3-win-x86_64WARNINGNov 02 2024
    R-4.3-mac-x86_64WARNINGNov 02 2024
    R-4.3-mac-aarch64WARNINGNov 02 2024

    Exports:exactPottsgetBlocksgetEdgesgetNeighborsgibbsGMMgibbsNormgibbsPottsinitSedkimcmcPottsmcmcPottsNoDatasmcPottssufficientStatswNoDatatestResample

    Dependencies:RcppRcppArmadillo

    bayesImageS: An R Package for Bayesian Image Segmentation using a Hidden Potts Model

    Rendered fromBackground.Rmdusingknitr::rmarkdownon Nov 02 2024.

    Last update: 2018-06-05
    Started: 2018-06-05

    mcmcPotts

    Rendered frommcmcPotts.Rmdusingknitr::rmarkdownon Nov 02 2024.

    Last update: 2018-06-05
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    mcmcPottsNoData

    Rendered frommcmcPottsNoData.Rmdusingknitr::rmarkdownon Nov 02 2024.

    Last update: 2018-06-05
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    swNoData

    Rendered fromswNoData.Rmdusingknitr::rmarkdownon Nov 02 2024.

    Last update: 2018-08-29
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