Changes in version 0.5-0 (2021-06-28) New Features - Zero MCMC iterations will be performed if the number of unique particles is already >= minPart (adaptive number of MCMC steps) - Replaced the default uniform prior distribution for the peak amplitudes with an exponential prior Bug Fixes - Merged pull request from Rcpp team to use constant M_PI instead of PI to support STRICT_R_HEADERS - Fixed issue with plots in Introduction vignette - Fixed broken link to EPSRC grants website (now uses UKRI Gateway to Research) - Added package Hmisc to suggests to fix Undeclared package in Rd xrefs NOTE on CRAN - Try-catch when computing Cholesky decomposition of the Gaussian random walk variance-covariance matrix (fallback to diagonal matrix by default) - Removed Travis CI from README, since builds have ceased on June 15, 2021 Changes in version 0.4-2 (2021-06-07) New Features - MCMC iterations will stop when temp ESS reaches the total number of particles (adaptive number of MCMC steps) - Added DOI from Zenodo to CITATION file. Bug Fixes - Fixed issue with digits = 0 in vignettes (CRAN WARN) - Removed obsolete call to Rcpp::LdFlags() from Makevars.win - Added fallback to boost MCMC acceptance rate if it falls below 15% of proposals - Regenerated the datasets result.rda & result2.rda to adjust for the new way of calculating FWHM Changes in version 0.4-1 (2020-02-05) New Features - Added example of fitSpectraSMC with informative priors to the methanol vignette. Bug Fixes - Removed the R package hyperSpec from Suggests because it is no longer available on CRAN. - Fixed dependency on hyperSpec in Introduction vignette due to new CRAN check. This also affects the TAMRA dataset. - Fixed a rare bug in reweighting that could potentially result in an infinite loop. - Peak locations are now constrained to lie within the range of observed wavelengths. - Locations are sorted to preserve identifiability. - Fixed error in equations for FWHM in mixedVoigt & getVoigtParam as well as in both vignettes. Changes in version 0.4-0 (2019-04-29) New Features - OpenMP implementation of mhUpdateVoigt provides around 3x improvement in elapsed runtime - New vignette illustrates when to use the 3 functions fitSpectraMCMC, fitSpectraSMC, and fitVoigtPeaksSMC - New datasets methanol and TAMRA for use in the vignettes - Debug output prints the means of the amplitudes of the peaks at each SMC iteration Bug Fixes - Fixed bug in fitVoigtPeaksSMC where it was using the upper-triangular instead of lower-triangular Cholesky factorisation to generate random-walk Metropolis proposals - Introduction vignette no longer attempts to download a .zip file over HTTPS - Deleted unused Rcpp function randomWalkVoigt Changes in version 0.3-13 (2018-06-05) - changed maintainer email address due to new academic affiliation - hex sticker in README Changes in version 0.3-12 (2018-02-18) New Features - Vignette with example for tetramethylrhodamine (TAMRA) - pkgdown website https://mooresm.github.io/serrsBayes/ Bug Fixes - Fixed compile errors on Solaris Changes in version 0.3-10 (2018-02-14) - First version released on CRAN